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1,460 claims from 908 papers are on the record. 46 have been checked so far; the other 1,414 have no check with a result yet.

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Keyword: atomic coordinates ×Clear all

3 claims from 2 papers

1. Biochemistry, Genetics and Molecular Biology › Protein Structure and Dynamics

   AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models

   Váradi, Anyango, Deshpande et al. · Nucleic Acids Research · 2021

   The paper presents AlphaFold DB, an open database of predicted protein structures, with over 360,000 structures across 21 model-organism proteomes at first release and planned expansion.

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   1. UncheckedThe AlphaFold database, built on DeepMind's AlphaFold v2.0, is described as greatly widening the share of known protein sequences with structural models.“Powered by AlphaFold v2.0 of DeepMind, it has enabled an unprecedented expansion of the structural coverage of the known protein-sequence space.”
   2. UncheckedAlphaFold DB's first release holds over 360,000 predicted protein structures from 21 model organisms, with expansion planned to most UniRef90 representative sequences.“The initial release of AlphaFold DB contains over 360,000 predicted structures across 21 model-organism proteomes, which will soon be expanded to cover most of the (over 100 million) representative sequences from the UniRef90 data set.”

2. Materials Science › Enzyme Structure and Function

   Protein Data Bank: the single global archive for 3D macromolecular structure data

   Burley, Berman, Bhikadiya et al. · Nucleic Acids Research · 2018

   The paper describes the Protein Data Bank as the single global archive of 3D biological macromolecule structures, covering its management, data format, deposition and validation systems, and future plans.

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   1. UncheckedThe PDB Core Archive holds atomic coordinates for over 144,000 models of proteins, DNA/RNA and their complexes, plus experimental data and metadata.“The PDB Core Archive houses 3D atomic coordinates of more than 144 000 structural models of proteins, DNA/RNA, and their complexes with metals and small molecules and related experimental data and metadata.”