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1,460 claims from 908 papers are on the record. 46 have been checked so far; the other 1,414 have no check with a result yet.

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Keyword: structural similarity ×Clear all

3 claims from 2 papers

1. Biochemistry, Genetics and Molecular Biology › Protein Structure and Dynamics

   TM-align: a protein structure alignment algorithm based on the TM-score

   Zhang · Nucleic Acids Research · 2005

   The paper presents TM-align, a protein structure alignment method built on the TM-score, and reports its speed, accuracy, and uses in comparing PDB structures and predicted models.

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   1. UncheckedThe TM-align algorithm runs about 4 times faster than CE and about 20 times faster than DALI and SAL when aligning protein structures.“The algorithm is approximately 4 times faster than CE and 20 times faster than DALI and SAL.”
   2. UncheckedOn average, TM-align's protein structure alignments are more accurate and cover more of the proteins than those from CE, DALI and SAL, the commonly used methods.“On average, the resulting structure alignments have higher accuracy and coverage than those provided by these most often-used methods.”

2. Biochemistry, Genetics and Molecular Biology › Protein Structure and Dynamics

   AlphaFill: enriching AlphaFold models with ligands and cofactors

   Hekkelman, de Vries, Joosten and Perrakis · Nature Methods · 2022

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   1. Unchecked“A total of 12,029,789 transplants were performed on 995,411 AlphaFold models and are available together with associated validation metrics in the alphafill.eu databank, a resource to help scientists make new hypotheses and design targeted experiments.”